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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6715065 chr2:132254224 T/C CCDC74B chr2:130896860-130902707:- 0.4 7.15 3.26E-12 Box Plot
THCA rs6715417 chr2:101091534 A/G LOC285359 chr3:101431278-101432259:+ 0.35 6.78 3.62E-11 Box Plot
THCA rs6715426 chr2:132254554 T/C CCDC74B chr2:130896860-130902707:- 0.4 7.09 4.96E-12 Box Plot
THCA rs6715850 chr2:132189164 G/A CCDC74B chr2:130896860-130902707:- 0.37 6.66 7.44E-11 Box Plot
THCA rs6716167 chr2:101166554 T/G LOC285359 chr3:101431278-101432259:+ 0.38 6.26 8.47E-10 Box Plot
THCA rs6716842 chr2:101066051 T/C LOC285359 chr3:101431278-101432259:+ 0.35 8.15 3.17E-15 Box Plot
THCA rs67172995 chr8:9284253 C/T SGK223 chr8:8175258-8244008:- 0.33 5.97 4.67E-9 Box Plot
THCA rs6717716 chr2:101066678 A/T LOC285359 chr3:101431278-101432259:+ -0.47 -11.23 3.83E-26 Box Plot
THCA rs67178025 chr2:113286023 A/G RGPD5 chr2:110550335-110615272:+ -0.5 -7.06 5.79E-12 Box Plot
THCA rs6718127 chr2:101141016 C/A LOC285359 chr3:101431278-101432259:+ 0.33 6.28 7.53E-10 Box Plot
THCA rs6718700 chr2:101061548 T/A LOC285359 chr3:101431278-101432259:+ 0.36 8.18 2.64E-15 Box Plot
THCA rs6719895 chr2:101071490 C/T LOC285359 chr3:101431278-101432259:+ 0.36 6.8 3.14E-11 Box Plot
THCA rs67201058 chr10:46040261 TTATAA/T AGAP7 chr10:51464162-51486327:- 0.35 6.2 1.2E-9 Box Plot
THCA rs6720500 chr2:101059522 G/A LOC285359 chr3:101431278-101432259:+ 0.35 6.58 1.27E-10 Box Plot
THCA rs6721063 chr2:151920528 A/G COG8 chr16:69360816-69373570:- -0.37 -6.36 4.87E-10 Box Plot